USER      =  jtomczak
HOMEDIR   =  /home/users/jtomczak
JOB_ID    =  10227
JOB_NAME  =  F40
QUEUE     =  wp10
NSLOTS    =  21
NHOSTS    =  2

SUB_HOST  =  rupc04
SUB_DIR   =  /mnt/wk07/jtomczak/DATA/MATERIALS/FeSi/DMFT/QMC/U5.0/FAST/beta40/nf6/NEW/imp.0

EXE_HOST  =  n162
NFS_HOST  =  caip02s
EXE_DIR   =  /mnt/p06
OUT_DIR   =  /tmp
TMP_DIR   =  /tmp/10227.1.wp10

INFO      =  Files larger than 100MB will be compressed to reduce the network load.
INFO2     =  Do NOT remove this file while job is running!

PORT      =  20227
rcp: /mnt/wk07/jtomczak/DATA/MATERIALS/FeSi/DMFT/QMC/U5.0/FAST/beta40/nf6/NEW/imp.0/9989jtomczak: not a plain file
Failure to rcp files!

Your job started at Sat Aug 13 14:30:59 EDT 2011 on host n162 in /mnt/p06/10227jtomczak
Submission directory is /mnt/wk07/jtomczak/DATA/MATERIALS/FeSi/DMFT/QMC/U5.0/FAST/beta40/nf6/NEW/imp.0 on host rupc04
-----------------------------------------------------------------------------------------
+ echo -catch_rsh /opt/sge6/spool/n162/active_jobs/10227.1/pe_hostfile /opt/mpich2/intel/11.1/
-catch_rsh /opt/sge6/spool/n162/active_jobs/10227.1/pe_hostfile /opt/mpich2/intel/11.1/
+ SLEEPTIME=5
+ RETRIES=10
+ catch_rsh=0
+ catch_hostname=0
+ '[' 3 -gt 0 ']'
+ case "$1" in
+ catch_rsh=1
+ shift
+ '[' 2 -gt 0 ']'
+ case "$1" in
+ break
++ basename /opt/sge6/mpich2_smpd/startmpich2.sh
+ me=startmpich2.sh
+ '[' 2 -lt 2 ']'
+ pe_hostfile=/opt/sge6/spool/n162/active_jobs/10227.1/pe_hostfile
+ MPICH2_ROOT=/opt/mpich2/intel/11.1/
+ export MPICH2_ROOT
+ '[' '!' -x /opt/sge6/mpich2_smpd/bin/lx26-amd64/start_mpich2 ']'
+ '[' '!' -x /opt/mpich2/intel/11.1//bin/smpd ']'
+ '[' '!' -r /opt/sge6/spool/n162/active_jobs/10227.1/pe_hostfile ']'
+ machines=/tmp/10227.1.wp10/machines
+ PeHostfile2MachineFile /opt/sge6/spool/n162/active_jobs/10227.1/pe_hostfile
+ cat /opt/sge6/spool/n162/active_jobs/10227.1/pe_hostfile
+ read line
++ echo n162 12 wp10@n162 UNDEFINED
++ cut -f1 '-d '
++ cut -f1 -d.
+ host=n162
++ echo n162 12 wp10@n162 UNDEFINED
++ cut -f2 '-d '
+ nslots=12
+ i=1
+ '[' 1 -le 12 ']'
+ echo n162
++ expr 1 + 1
+ i=2
+ '[' 2 -le 12 ']'
+ echo n162
++ expr 2 + 1
+ i=3
+ '[' 3 -le 12 ']'
+ echo n162
++ expr 3 + 1
+ i=4
+ '[' 4 -le 12 ']'
+ echo n162
++ expr 4 + 1
+ i=5
+ '[' 5 -le 12 ']'
+ echo n162
++ expr 5 + 1
+ i=6
+ '[' 6 -le 12 ']'
+ echo n162
++ expr 6 + 1
+ i=7
+ '[' 7 -le 12 ']'
+ echo n162
++ expr 7 + 1
+ i=8
+ '[' 8 -le 12 ']'
+ echo n162
++ expr 8 + 1
+ i=9
+ '[' 9 -le 12 ']'
+ echo n162
++ expr 9 + 1
+ i=10
+ '[' 10 -le 12 ']'
+ echo n162
++ expr 10 + 1
+ i=11
+ '[' 11 -le 12 ']'
+ echo n162
++ expr 11 + 1
+ i=12
+ '[' 12 -le 12 ']'
+ echo n162
++ expr 12 + 1
+ i=13
+ '[' 13 -le 12 ']'
+ read line
++ echo n146 9 wp10@n146 UNDEFINED
++ cut -f1 '-d '
++ cut -f1 -d.
+ host=n146
++ echo n146 9 wp10@n146 UNDEFINED
++ cut -f2 '-d '
+ nslots=9
+ i=1
+ '[' 1 -le 9 ']'
+ echo n146
++ expr 1 + 1
+ i=2
+ '[' 2 -le 9 ']'
+ echo n146
++ expr 2 + 1
+ i=3
+ '[' 3 -le 9 ']'
+ echo n146
++ expr 3 + 1
+ i=4
+ '[' 4 -le 9 ']'
+ echo n146
++ expr 4 + 1
+ i=5
+ '[' 5 -le 9 ']'
+ echo n146
++ expr 5 + 1
+ i=6
+ '[' 6 -le 9 ']'
+ echo n146
++ expr 6 + 1
+ i=7
+ '[' 7 -le 9 ']'
+ echo n146
++ expr 7 + 1
+ i=8
+ '[' 8 -le 9 ']'
+ echo n146
++ expr 8 + 1
+ i=9
+ '[' 9 -le 9 ']'
+ echo n146
++ expr 9 + 1
+ i=10
+ '[' 10 -le 9 ']'
+ read line
+ cat /tmp/10227.1.wp10/machines
n162
n162
n162
n162
n162
n162
n162
n162
n162
n162
n162
n162
n146
n146
n146
n146
n146
n146
n146
n146
n146
+ '[' 1 = 1 ']'
+ rsh_wrapper=/opt/sge6/mpich2_smpd/rsh
+ '[' '!' -x /opt/sge6/mpich2_smpd/rsh ']'
+ rshcmd=rsh
+ case "$ARC" in
+ ln -s /opt/sge6/mpich2_smpd/rsh /tmp/10227.1.wp10/rsh
+ hash -r
+ '[' 0 = 1 ']'
+ port=20227
++ cat /tmp/10227.1.wp10/machines
++ uniq
+ for host in '`cat $machines | uniq`'
+ /opt/sge6/mpich2_smpd/bin/lx26-amd64/start_mpich2 -n n162 /opt/mpich2/intel/11.1//bin/smpd 20227
+ for host in '`cat $machines | uniq`'
+ /opt/sge6/mpich2_smpd/bin/lx26-amd64/start_mpich2 -n n146 /opt/mpich2/intel/11.1//bin/smpd 20227
+ actual_retry=1
+ '[' 1 -le 10 ']'
+ echo 'startmpich2.sh: check for smpd daemons (1 of 10)'
startmpich2.sh: check for smpd daemons (1 of 10)
+ numhosts=0
++ cat /tmp/10227.1.wp10/machines
++ uniq
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 20227 -status n162
++ head -n 1
++ cut -f 1 -d ' '
Assertion failed in file smpd_sock_wait.i at line 337: pollinfo->state == SMPDU_SOCKI_STATE_DISCONNECTED && pollfd->fd == -1
internal ABORT - process 0
+ '[' '' == smpd ']'
+ echo 'startmpich2.sh: missing smpd on n162'
startmpich2.sh: missing smpd on n162
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 20227 -status n146
++ head -n 1
++ cut -f 1 -d ' '
Assertion failed in file smpd_sock_wait.i at line 337: pollinfo->state == SMPDU_SOCKI_STATE_DISCONNECTED && pollfd->fd == -1
internal ABORT - process 0
+ '[' '' == smpd ']'
+ echo 'startmpich2.sh: missing smpd on n146'
startmpich2.sh: missing smpd on n146
+ '[' 2 -eq 0 ']'
+ sleep 5
rsh n162 /opt/mpich2/intel/11.1//bin/smpd -port 20227 -d 0
rsh n146 /opt/mpich2/intel/11.1//bin/smpd -port 20227 -d 0
+ (( actual_retry += 1 ))
+ '[' 2 -le 10 ']'
+ echo 'startmpich2.sh: check for smpd daemons (2 of 10)'
startmpich2.sh: check for smpd daemons (2 of 10)
+ numhosts=0
++ cat /tmp/10227.1.wp10/machines
++ uniq
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 20227 -status n162
++ head -n 1
++ cut -f 1 -d ' '
+ '[' smpd == smpd ']'
+ (( numhosts += 1 ))
+ echo 'startmpich2.sh: found running smpd on n162'
startmpich2.sh: found running smpd on n162
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 20227 -status n146
++ head -n 1
++ cut -f 1 -d ' '
+ '[' smpd == smpd ']'
+ (( numhosts += 1 ))
+ echo 'startmpich2.sh: found running smpd on n146'
startmpich2.sh: found running smpd on n146
+ '[' 2 -eq 2 ']'
+ echo 'startmpich2.sh: got all 2 of 2 nodes'
startmpich2.sh: got all 2 of 2 nodes
+ exit 0
rm: cannot remove `mpi_prefix.dat': No such file or directory
gzip: *.gz: No such file or directory
rm: cannot remove `wnohu*': No such file or directory
START
END
Thu Aug 18 03:33:48 EDT 2011
-catch_rsh /opt/mpich2/intel/11.1/
Your job finished at Thu Aug 18 03:33:54 EDT 2011